GO dataset in current version
Source Source Format Version No. of total GO terms
The Gene Ontology project mySQL 2009-10-04 29775

Sequence data sources
Species Version Sources
Arabidopsis thaliana TAIR9 The Arabidopsis Information Resource
Oryza sativa (TIGR) Release 6.1 Rice Genome Annotation Project
Oryza sativa (KOME) 2008-01-24 Rice KOME
Oryza sativa (Gramene) Release 30 Rice Gramene
Zea mays ssp (maize) Release 4a.53 MaizeSequence.org
Populus trichocarpa (poplar) Release 1.1 JGI
Vitis vinifera (grape) Version 1.0genoscope
Sorghum bicolor (sorghum) Version1.0 sbi1.4 phytozome (sorghum)
Glycine max (soybean) Glyma1.0 phytozome (soybean)
Medicago truncatula (medicago) Release Mt2.0 Medicago.org
Medicago truncatula (medicago) Release Mt3.0 Medicago.org
Magnaporthe grisea Version 6.0Magnaporthe grisea Database
Bos taurus (bovine) Official Gene Set V1 Bovine Genome Database
Bombyx mori (silkworm) Version 1.0 SilkDB
Brachypodium distachyon Version 4 phytozome
Ricinus communis (Castor bean) Version 1 Castor Bean Genome Database

 

Consensus table for data types
Name Species Data type Annotation source Annotated number
arabidopsis Arabidopsis thaliana arabAffy8K blast 8184
arabidopsis Arabidopsis thaliana arabATH1 blast 22479
arabidopsis Arabidopsis thaliana TAIRgenemodel maintained 37767
arabidopsis Arabidopsis thaliana TAIRloci maintained 31819
arabidopsis Arabidopsis thaliana TAIRalias maintained 8492
arabidopsis Arabidopsis thaliana GPL2810 blast 27015
arabidopsis Arabidopsis thaliana GPL2871 blast 25596
arabidopsis Arabidopsis thaliana GPL988 blast 18071
arabidopsis Arabidopsis thaliana arabGB b2g 58367
arabidopsis Arabidopsis thaliana arabDDBJ b2g 14907
arabidopsis Arabidopsis thaliana arabEMBL b2g 26205
arabidopsis Arabidopsis thaliana arabSwiss b2g 7112
arabidopsis Arabidopsis thaliana arabTrembl b2g 35266
arabidopsis Arabidopsis thaliana arabRefseq b2g 28031
arabidopsis Arabidopsis thaliana arabPDB b2g 664
populus Populus trichocarpa poplarAffy b2g 35906
populus Populus trichocarpa populus b2g 36285
populus Populus trichocarpa populusJGIfull b2g 36433
populus Populus trichocarpa populusGB b2g 32556
populus Populus trichocarpa populusEMBL b2g 91
populus Populus trichocarpa populusSwiss b2g 80
populus Populus trichocarpa populusTrembl b2g 3024
populus Populus trichocarpa populusRefseq b2g 99
populus Populus trichocarpa populusPDB b2g 5
grape Vitis vinifera grapeAffy b2g 11205
grape Vitis vinifera grapeloci b2g 24989
grape Vitis vinifera grapeGB b2g 847
grape Vitis vinifera grapeDDBJ b2g 48
grape Vitis vinifera grapeEMBL b2g 46533
grape Vitis vinifera grapeSwiss b2g 118
grape Vitis vinifera grapeTrembl b2g 46017
grape Vitis vinifera grapeRefseq b2g 84
grape Vitis vinifera grapePDB b2g 24
soybean Glycine max soybean b2g 60319
soybean Glycine max soybeanOnlyAffy b2g 24201
soybean Glycine max soybeanGB b2g 1826
soybean Glycine max soybeanDDBJ b2g 282
soybean Glycine max soybeanEMBL b2g 5072
soybean Glycine max soybeanSwiss b2g 342
soybean Glycine max soybeanTrembl b2g 1939
soybean Glycine max soybeanRefseq b2g 83
soybean Glycine max soybeanPDB b2g 135
medicago Medicago truncatula medicago interproscan 13234
medicago Medicago truncatula medicagoUrMeLDB b2g 2019
medicago Medicago truncatula medicagoOnlyAffy b2g 31225
medicago Medicago truncatula medicagoGB b2g 4891
medicago Medicago truncatula medicagoDDBJ b2g 4
medicago Medicago truncatula medicagoEMBL b2g 254
medicago Medicago truncatula medicagoSwiss b2g 38
medicago Medicago truncatula medicagoTrembl b2g 4834
medicago Medicago truncatula medicagoRefseq b2g 76
medicago Medicago truncatula medicagoPDB b2g 11
medicago Medicago truncatula medicagoGenomeV3 pfam 23103
medicago Medicago truncatula medicagoPEPV3 pfam 24977
citrus Citrus sinensis citrusAffy b2g 21286
tomato Solanum lycopersicum tomatoAffy b2g 7809
tomato Solanum lycopersicum tomatoBAC b2g 5626
tomato Solanum lycopersicum tomatoTOM1 blast 7925
tomato Solanum lycopersicum tomatoGB b2g 1465
tomato Solanum lycopersicum tomatoDDBJ b2g 79
tomato Solanum lycopersicum tomatoEMBL b2g 1570
tomato Solanum lycopersicum tomatoSwiss b2g 399
tomato Solanum lycopersicum tomatoTrembl b2g 1524
tomato Solanum lycopersicum tomatoRefseq b2g 84
tomato Solanum lycopersicum tomatoPDB b2g 28
cotton Gossypium cottonAffy b2g 19663
cotton Gossypium cottonGB b2g 1355
cotton Gossypium cottonDDBJ b2g 91
cotton Gossypium cottonEMBL b2g 462
cotton Gossypium cottonSwiss b2g 223
cotton Gossypium cottonTrembl b2g 1166
cotton Gossypium cottonRefseq b2g 167
cotton Gossypium cottonPDB b2g 2
castor_bean Ricinus communis castor_beanloci pfam 19659
lotus Lotus japonicus lotus_genome b2g 1194
lotus Lotus japonicus kazusa b2g 30415
lotus Lotus japonicus lotusGB b2g 130
lotus Lotus japonicus lotusDDBJ b2g 273
lotus Lotus japonicus lotusEMBL b2g 207
lotus Lotus japonicus lotusSwiss b2g 104
lotus Lotus japonicus lotusTrembl b2g 386
lotus Lotus japonicus lotusRefseq b2g 82
apple Malus x domestica appleGB b2g 1048
apple Malus x domestica appleDDBJ b2g 103
apple Malus x domestica appleEMBL b2g 224
apple Malus x domestica appleSwiss b2g 38
apple Malus x domestica appleTrembl b2g 900
apple Malus x domestica applePDB b2g 5
bean Phaseolus vulgaris beanGB b2g 615
bean Phaseolus vulgaris beanDDBJ b2g 46
bean Phaseolus vulgaris beanEMBL b2g 208
bean Phaseolus vulgaris beanSwiss b2g 155
bean Phaseolus vulgaris beanTrembl b2g 506
bean Phaseolus vulgaris beanRefseq b2g 83
bean Phaseolus vulgaris beanPDB b2g 39
lettuce Lactuca sativa lettuceGB b2g 313
lettuce Lactuca sativa lettuceDDBJ b2g 124
lettuce Lactuca sativa lettuceEMBL b2g 109
lettuce Lactuca sativa lettuceSwiss b2g 84
lettuce Lactuca sativa lettuceTrembl b2g 233
lettuce Lactuca sativa lettuceRefseq b2g 84
pepper Capsicum annuum pepperGB b2g 583
pepper Capsicum annuum pepperDDBJ b2g 8
pepper Capsicum annuum pepperEMBL b2g 216
pepper Capsicum annuum pepperSwiss b2g 37
pepper Capsicum annuum pepperTrembl b2g 575
pepper Capsicum annuum pepperPDB b2g 4
tobacco Nicotiana tabacum tobaccoGB b2g 1189
tobacco Nicotiana tabacum tobaccoDDBJ b2g 675
tobacco Nicotiana tabacum tobaccoEMBL b2g 1435
tobacco Nicotiana tabacum tobaccoSwiss b2g 432
tobacco Nicotiana tabacum tobaccoTrembl b2g 2092
tobacco Nicotiana tabacum tobaccoRefseq b2g 251
tobacco Nicotiana tabacum tobaccoPDB b2g 116
sun_flower Helianthus annuus sun_flowerGB b2g 2767
sun_flower Helianthus annuus sun_flowerDDBJ b2g 8
sun_flower Helianthus annuus sun_flowerEMBL b2g 247
sun_flower Helianthus annuus sun_flowerSwiss b2g 125
sun_flower Helianthus annuus sun_flowerTrembl b2g 968
sun_flower Helianthus annuus sun_flowerRefseq b2g 85
sun_flower Helianthus annuus sun_flowerPDB b2g 1
cucumber Cucumis sativus cucumberGB b2g 601
cucumber Cucumis sativus cucumberDDBJ b2g 74
cucumber Cucumis sativus cucumberEMBL b2g 198
cucumber Cucumis sativus cucumberSwiss b2g 121
cucumber Cucumis sativus cucumberTrembl b2g 451
cucumber Cucumis sativus cucumberRefseq b2g 84
cucumber Cucumis sativus cucumberPDB b2g 3
rice Oryza sativa Japonica riceAffy b2g 45078
rice Oryza sativa Japonica riceGramene maintained 41321
rice Oryza sativa Japonica riceKOME maintained 30682
rice Oryza sativa Japonica riceTIGRgenemodel maintained 45281
rice Oryza sativa Japonica riceTIGRloci maintained 18307
rice Oryza sativa Japonica GPL892 blast 18734
rice Oryza sativa Japonica GPL1829 blast 42297
rice Oryza sativa Japonica riceNCBI blast 23155
rice Oryza sativa Japonica riceGI b2g 19393
rice Oryza sativa Japonica riceGB b2g 35364
rice Oryza sativa Japonica riceDDBJ b2g 49534
rice Oryza sativa Japonica riceEMBL b2g 8852
rice Oryza sativa Japonica riceSwiss b2g 1938
rice Oryza sativa Japonica riceTrembl b2g 52712
rice Oryza sativa Japonica riceRefseq b2g 19529
rice Oryza sativa Japonica ricePDB b2g 21
riceIndica Oryza sativa Indica riceIndicaGB b2g 15787
riceIndica Oryza sativa Indica riceIndicaDDBJ b2g 137
riceIndica Oryza sativa Indica riceIndicaEMBL b2g 2194
riceIndica Oryza sativa Indica riceIndicaSwiss b2g 436
riceIndica Oryza sativa Indica riceIndicaTrembl b2g 12936
riceIndica Oryza sativa Indica riceIndicaRefseq b2g 104
maize Zea mays ssp maize interproscan 13643
maize Zea mays ssp maizeAffy b2g 13162
maize Zea mays ssp maizePEP interproscan 21378
maize Zea mays ssp GPL6438 blast 39870
maize Zea mays ssp maizeGB b2g 27133
maize Zea mays ssp maizeDDBJ b2g 109
maize Zea mays ssp maizeEMBL b2g 5228
maize Zea mays ssp maizeSwiss b2g 582
maize Zea mays ssp maizeTrembl b2g 20996
maize Zea mays ssp maizeRefseq b2g 4108
maize Zea mays ssp maizePDB b2g 181
sorghum Sorghum bicolor sorghumGenemodel b2g 26245
sorghum Sorghum bicolor sorghumGB b2g 4038
sorghum Sorghum bicolor sorghumDDBJ b2g 4
sorghum Sorghum bicolor sorghumEMBL b2g 289
sorghum Sorghum bicolor sorghumSwiss b2g 117
sorghum Sorghum bicolor sorghumTrembl b2g 908
sorghum Sorghum bicolor sorghumRefseq b2g 116
sorghum Sorghum bicolor sorghumPDB b2g 15
wheat Triticum aestivum wheatAffy b2g 34647
wheat Triticum aestivum wheatGB b2g 3048
wheat Triticum aestivum wheatDDBJ b2g 474
wheat Triticum aestivum wheatEMBL b2g 1607
wheat Triticum aestivum wheatSwiss b2g 320
wheat Triticum aestivum wheatTrembl b2g 2932
wheat Triticum aestivum wheatRefseq b2g 122
wheat Triticum aestivum wheatPDB b2g 75
barley Hordeum vulgare barleyAffy b2g 15179
barley Hordeum vulgare barleyGB b2g 988
barley Hordeum vulgare barleyDDBJ b2g 126
barley Hordeum vulgare barleyEMBL b2g 750
barley Hordeum vulgare barleySwiss b2g 328
barley Hordeum vulgare barleyTrembl b2g 1008
barley Hordeum vulgare barleyPDB b2g 104
sugarcane Saccharum officinarum sugarcaneAffy b2g 5694
bradi Brachypodium distachyon bradi pfam 25219
bradi Brachypodium distachyon bradiOther b2g 25941
bradi Brachypodium distachyon bradiGB b2g 92
bradi Brachypodium distachyon bradiEMBL b2g 11
bradi Brachypodium distachyon bradiSwiss b2g 29
bradi Brachypodium distachyon bradiTrembl b2g 68
bradi Brachypodium distachyon bradiRefseq b2g 81
chicken Gallus gallus chickenAffy b2g 24599
chicken Gallus gallus chickenENSEMBL b2g 19470
chicken Gallus gallus chickenGI b2g 32495
chicken Gallus gallus chickenGB b2g 3714
chicken Gallus gallus chickenDDBJ b2g 1295
chicken Gallus gallus chickenEMBL b2g 3795
chicken Gallus gallus chickenSwiss b2g 2061
chicken Gallus gallus chickenTrembl b2g 5392
chicken Gallus gallus chickenRefseq b2g 16477
chicken Gallus gallus chickenPDB b2g 1233
bovine Bos taurus bovine interproscan 14927
bovine Bos taurus bovineAffy b2g 11138
bovine Bos taurus bovineGI b2g 44311
bovine Bos taurus bovineENSEMBL b2g 25160
bovine Bos taurus bovineGB b2g 17703
bovine Bos taurus bovineDDBJ b2g 1164
bovine Bos taurus bovineEMBL b2g 1225
bovine Bos taurus bovineSwiss b2g 5345
bovine Bos taurus bovineTrembl b2g 9187
bovine Bos taurus bovineRefseq b2g 21876
bovine Bos taurus bovinePDB b2g 3415
porcine Sus scrofa porcineAffy b2g 9627
porcine Sus scrofa porcineGB b2g 7019
porcine Sus scrofa porcineDDBJ b2g 962
porcine Sus scrofa porcineEMBL b2g 1558
porcine Sus scrofa porcineSwiss b2g 1329
porcine Sus scrofa porcineTrembl b2g 5348
porcine Sus scrofa porcineRefseq b2g 7288
porcine Sus scrofa porcinePDB b2g 873
grisea Magnaporthe grisea grisea blast 10431
grisea Magnaporthe grisea griseaAgilent blast 16173
grisea Magnaporthe grisea griseaGB b2g 406
grisea Magnaporthe grisea griseaDDBJ b2g 51
grisea Magnaporthe grisea griseaEMBL b2g 26
grisea Magnaporthe grisea griseaSwiss b2g 175
grisea Magnaporthe grisea griseaTrembl b2g 8487
grisea Magnaporthe grisea griseaPDB b2g 57
silkworm Bombyx mori silkworm interproscan 7271
silkworm Bombyx mori silkwormGB b2g 1502
silkworm Bombyx mori silkwormDDBJ b2g 763
silkworm Bombyx mori silkwormEMBL b2g 139
silkworm Bombyx mori silkwormSwiss b2g 161
silkworm Bombyx mori silkwormTrembl b2g 1953
silkworm Bombyx mori silkwormRefseq b2g 1529
silkworm Bombyx mori silkwormPDB b2g 22
peanut Arachis hypogaea peanutGB b2g 648
peanut Arachis hypogaea peanutDDBJ b2g 6
peanut Arachis hypogaea peanutEMBL b2g 36
peanut Arachis hypogaea peanutSwiss b2g 23
peanut Arachis hypogaea peanutTrembl b2g 569
peanut Arachis hypogaea peanutPDB b2g 113
cabbage Brassica oleracea cabbageGB b2g 488
cabbage Brassica oleracea cabbageDDBJ b2g 124
cabbage Brassica oleracea cabbageEMBL b2g 248
cabbage Brassica oleracea cabbageSwiss b2g 29
cabbage Brassica oleracea cabbageTrembl b2g 683
oilseed_rape Brassica napus oilseed_rapeGB b2g 730
oilseed_rape Brassica napus oilseed_rapeDDBJ b2g 146
oilseed_rape Brassica napus oilseed_rapeEMBL b2g 1465
oilseed_rape Brassica napus oilseed_rapeSwiss b2g 143
oilseed_rape Brassica napus oilseed_rapeTrembl b2g 983
oilseed_rape Brassica napus oilseed_rapeRefseq b2g 85
oilseed_rape Brassica napus oilseed_rapePDB b2g 8
chinese_cabbage Brassica rapa chinese_cabbageGB b2g 381
chinese_cabbage Brassica rapa chinese_cabbageDDBJ b2g 189
chinese_cabbage Brassica rapa chinese_cabbageEMBL b2g 135
chinese_cabbage Brassica rapa chinese_cabbageSwiss b2g 17
chinese_cabbage Brassica rapa chinese_cabbageTrembl b2g 557
chinese_cabbage Brassica rapa chinese_cabbagePDB b2g 4
mustard Brassica juncea mustardGB b2g 257
mustard Brassica juncea mustardDDBJ b2g 14
mustard Brassica juncea mustardEMBL b2g 166
mustard Brassica juncea mustardSwiss b2g 26
mustard Brassica juncea mustardTrembl b2g 310
mustard Brassica juncea mustardPDB b2g 20