Notice: Collaboration with REVIGO!

Current version: 1.2

New version: 2.0

Last maintain: 2017-04-04

Supported categories: Gene Ontology

Supported species: 45

Tools number: 6

Supported datatypes: 292

Total ID number: 3013623

Total annotation: 94308148

Finished job: 86833

Newly added datatype: TAIR 10 loci ID, cotton genome loci ID, grape genome transcript ID v2.0

Administrator: Xuelian Ma in Su Zhen's lab

Bug report: Xuelian Ma

Old version: EasyGO

Welcome to agriGO -- GO Analysis Toolkit and Database for Agricultural Community

The agriGO is a web-based tool and database for the gene ontology analysis. It supports specicial focus on agricultural species and is user-friendly.

The agriGO is designed to provide deep support to agricultural community in the realm of ontology analysis. Compared to other available GO analysis tools, unique advantages and features of agriGO are:

1. The agriGO especially focuses on agricultural species. It supports 45 species and 292 datatypes currently. And agriGO is designed as an user-friendly web server.

2. New tools including PAGE (Parametric Analysis of Gene set Enrichment), BLAST4ID (Transfer IDs by BLAST) and SEACOMPARE (Cross comparison of SEA) were developed. The arrival of these tools provides users with possibilities for data mining and systematic result exploration and will allow better data analysis and interpretation.

3. The exploratory capability and result visualization are enhanced. Results are provided in different formats: HTML tables, tabulated text files, hierarchical tree graphs, and flash bar graphs.

4. In agriGO, PAGE and SEACOMPARE can be used to carry out cross-comparisons of results derived from different data sets, which is very important when studying multiple groups of experiments, such as in time-course research.

How to cite agriGO

Zhou Du, Xin Zhou, Yi Ling, Zhenhai Zhang, and Zhen Su agriGO: a GO analysis toolkit for the agricultural community Nucleic Acids Research Advance Access published on July 1, 2010, DOI 10.1093/nar/gkq310. Nucl. Acids Res. 38: W64-W70.
Evaluation to the paper of agriGO from Faculty of 1000 biology

agriGO v2.0: Tian Tian, Yue Liu, Hengyu Yan, Qi You, Xin Yi, Zhou Du, Wenying Xu, Zhen Su; agriGO v2.0: a GO analysis toolkit for the agricultural community, 2017 update. Nucleic Acids Res 2017 gkx382. doi: 10.1093/nar/gkx382


Homo sapiens (DAVID Database) is available now!

The agriGO v2.0 is online now!

Moso bamboo(BambooGDB),Glycyrrhiza uralensis(Glycyrrhiza uralensis GDB) and Raphanus sativus(Raphanus sativus Genome DataBase) are available now!

Citrus clementina(Phytozome v11) is available now!

Panicum virgatum v3.1(Switchgrass) is available now!

musa acuminata v2(Banana Genome Hub) is available now!

Blumeria graminis (Uniprot) and Anthracocystis flocculosa (Uniprot) are available now!

Zea mays AGPv3.30 (Gramene) is available now!

Shrub willow (phytozome) is available now!

>>> View all agriGO news